Highlights
- •17 cases of FIGO stage III low-grade serous carcinoma/serous borderline tumors underwent molecular profiling.
- •Tumor mutational burdens were generally low (range 3–10 mutations/Mb in 14 cases assessed).
- •Microsatellites were assessed to be stable in 12/12 cases.
- •The majority of tumors (11/17) harbored a clear driver mutation in forms of RTK/RAS/MAPK pathway gene mutations.
- •While BRCA2 variants were seen in 5/17 cases, further analyses suggest they are unlikely to be clinically significant.
Abstract
Objective
The mutational spectra of low-grade serous carcinomas (LGSCs) and serous borderline
tumors (SBTs) of the ovary are poorly characterized. We present 17 cases of advanced
or recurrent LGSC/SBT patients who underwent molecular profiling.
Methods
Thirteen LGSCs and four SBTs underwent targeted gene panel testing by massively parallel
sequencing. Microsatellite stability and tumor mutation burdens (TMBs) were determined
based on panel sequencing data.
Results
The mean TMB was 5.2 mutations/megabase (range 3–10) in 14 cases. Twelve of twelve
(12/12) cases were microsatellite stable. Clear driver mutations were identified in
11 cases, namely KRAS (5/17), BRAF (2/17), NRAS (2/17) and ERBB2 (2/17). Five cases harbored BRCA2 alterations (allele fractions: 44–51%), including two classified as likely benign/benign
variants, and three classified as variants of uncertain significance (VUSs), with
two variants being confirmed to be germline. The three BRCA2 VUSs were missense variants that were assessed to be of unlikely clinical significance,
based on family cancer history and expected impact on protein function. Two patients
received PARP inhibitors during their disease course, with neither of the patients
demonstrating appreciable response.
Conclusions
The mutational spectra in 17 clinically aggressive SBT/LGSC cases demonstrate genomically
stable tumors, frequently driven by the RTK/RAS/MAPK pathway. While BRCA2 variants were identified, our data demonstrate BRCA2 gene variants are at most VUSs and of dubious clinical significance, in contrast
to disease-associated BRCA1/2 variants that may be identified in high-grade serous carcinoma. Germline testing
and PARP inhibitors are thus expected to provide limited benefit to patients with
LGSC/SBTs.
Keywords
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References
- Grading ovarian serous carcinoma using a two-tier system.Am. J. Surg. Pathol. 2004; 28: 496-504https://doi.org/10.1097/00000478-200404000-00009
- Integrated genomic analyses of ovarian carcinoma.Nature. 2011; 474: 609-615https://doi.org/10.1038/nature10166
- Reclassification of serous ovarian carcinoma by a 2-tier system: a Gynecologic Oncology Group Study.Cancer. 2012; 118: 3087-3094https://doi.org/10.1002/cncr.26618
- Primary site assignment in tubo-ovarian high-grade serous carcinoma: consensus statement on unifying practice worldwide.Gynecol. Oncol. 2016; 141: 195-198https://doi.org/10.1016/j.ygyno.2015.10.022
- The fallopian tube, “precursor escape” and narrowing the knowledge gap to the origins of high-grade serous carcinoma.Gynecol. Oncol. 2019; 152: 426-433https://doi.org/10.1016/j.ygyno.2018.11.033
- Fallopian tube precursors of ovarian low- and high-grade serous neoplasms.Histopathology. 2013; 62: 44-58https://doi.org/10.1111/his.12046
- Tubal origin of ‘ovarian’ low-grade serous carcinoma.Mod. Pathol. 2011; 24: 1488-1499https://doi.org/10.1038/modpathol.2011.106
- Female Genital Tumours.5th ed. vol. 4. International Agency for Research on Cancer, Lyon (France)2020 (WHO classification of tumours series)
- Loss of 1p36.33 frequent in low-grade serous ovarian cancer.Neoplasia. 2019; 21: 582-590https://doi.org/10.1016/j.neo.2019.03.014
- Molecular profiling of low grade serous ovarian tumours identifies novel candidate driver genes.Oncotarget. 2015; 6: 37663-37677https://doi.org/10.18632/oncotarget.5438
- Genomic classification of serous ovarian cancer with adjacent borderline differentiates RAS pathway and TP53-mutant tumors and identifies NRAS as an oncogenic driver.Clin. Cancer Res. 2014; 20: 6618-6630https://doi.org/10.1158/1078-0432.CCR-14-1292
- Mutation of NRAS is a rare genetic event in ovarian low-grade serous carcinoma.Hum. Pathol. 2017; 68: 87-91https://doi.org/10.1016/j.humpath.2017.08.021
- Clinicopathologic and molecular features of paired cases of metachronous ovarian serous borderline tumor and subsequent serous carcinoma.Am. J. Surg. Pathol. 2019; 43: 1462-1472https://doi.org/10.1097/PAS.0000000000001325
- Sequence mutations and amplification of PIK3CA and AKT2 genes in purified ovarian serous neoplasms.Cancer Biol. Ther. 2006; 5: 779-785https://doi.org/10.4161/cbt.5.7.2751
- High frequency of PIK3CA mutations in low-grade serous ovarian carcinomas of Japanese patients.Diagnostics (Basel). 2019; 27: 13-21https://doi.org/10.3390/diagnostics10010013
- mRNA expression in low grade serous ovarian cancer: results of a nanoString assay in a diverse population.Gynecol. Oncol. 2020; 159: 554-562https://doi.org/10.1016/j.ygyno.2020.08.030
- PARP inhibitors: clinical utility and possibilities of overcoming resistance.Gynecol. Oncol. 2017; 147: 695-704https://doi.org/10.1016/j.ygyno.2017.10.003
- Integrated genomic analyses of ovarian carcinoma.Nature. 2011; 474: 609-615https://doi.org/10.1038/nature10166
- Low grade serious carcinoma of the peritoneum in a BRCA1 carrier previously diagnosed with a "low-grade serous tubal intra-epithelial carcinoma" (STIC) on risk reducing surgery.Gynecol. Oncol. Rep. 2015; 12: 72-74https://doi.org/10.1016/j.gore.2015.03.007
- Inherited mutations in women with ovarian carcinoma.JAMA Oncol. 2016; 2: 482-490https://doi.org/10.1001/jamaoncol.2015.5495
- Standards and guidelines for the interpretation and reporting of sequence variants in cancer: a joint consensus recommendation of the Association for Molecular Pathology, American Society of Clinical Oncology, and College of American Pathologists.J. Mol. Diagn. 2017; 19: 4-23https://doi.org/10.1016/j.jmoldx.2016.10.002
- The NF2 tumor suppressor merlin interacts with Ras and RasGAP, which may modulate Ras signaling.Oncogene. 2019; 38: 6370-6381https://doi.org/10.1038/s41388-019-0883-6
- A polymorphic stop codon in BRCA2.Nat. Genet. 1996; 14: 253-254https://doi.org/10.1038/ng1196-253
- Global sequence diversity of BRCA2: analysis of 71 breast cancer families and 95 control individuals of worldwide populations.Hum. Mol. Genet. 1999; 8: 413-423https://doi.org/10.1093/hmg/8.3.413
- The BRCA2 polymorphic stop codon: stuff or nonsense?.J. Med. Genet. 2015; 52: 642-645https://doi.org/10.1136/jmedgenet-2015-103206
- Reevaluation of the BRCA2 truncating allele c.9976A>T (p.Lys3326Ter) in a familial breast cancer context.Sci. Rep. 2015; 5: 14800https://doi.org/10.1038/srep14800
- Association of BRCA2 K3326* with small cell lung cancer and squamous cell cancer of the skin.J. Natl. Cancer Inst. 2018; 110: 967-974https://doi.org/10.1093/jnci/djy002
- Functional evaluation and cancer risk assessment of BRCA2 unclassified variants.Cancer Res. 2005; 65: 417-426
- A second DNA binding site in human BRCA2 promotes homologous recombination.Nat. Commun. 2016; 7: 12813https://doi.org/10.1038/ncomms12813
- BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure.Science. 2002; 297: 1837-1848https://doi.org/10.1126/science.297.5588.1837
- Crystal structure of the BARD1 ankyrin repeat domain and its functional consequences.J. Biol. Chem. 2008; 283: 21179-21186https://doi.org/10.1074/jbc.M802333200
- A population-based analysis of germline BRCA1 and BRCA2 testing among ovarian cancer patients in an era of histotype-specific approaches to ovarian cancer prevention.BMC Cancer. 2018; 18: 254https://doi.org/10.1186/s12885-018-4153-8
- Low-grade serous carcinomas of the ovary contain very few point mutations.J. Pathol. 2012; 226: 413-420https://doi.org/10.1002/path.3967
- Is low-grade serous ovarian cancer part of the tumor spectrum of hereditary breast and ovarian cancer?.Gynecol. Oncol. 2011; 120: 229-232https://doi.org/10.1016/j.ygyno.2010.10.033
- Telomeric allelic imbalance indicates defective DNA repair and sensitivity to DNA-damaging agents.Cancer Discov. 2012; 2: 366-375https://doi.org/10.1158/2159-8290.CD-11-0206
- Patterns of genomic loss of heterozygosity predict homologous recombination repair defects in epithelial ovarian cancer.Br. J. Cancer. 2012; 107: 1776-1782https://doi.org/10.1038/bjc.2012.451
- Ploidy and large-scale genomic instability consistently identify basal-like breast carcinomas with BRCA1/2 inactivation.Cancer Res. 2012; 72: 5454-5462https://doi.org/10.1158/0008-5472.CAN-12-1470
Article info
Publication history
Published online: March 24, 2021
Accepted:
March 15,
2021
Received:
January 21,
2021
Identification
Copyright
© 2021 Elsevier Inc. All rights reserved.